snaketron/genphen: A tool for quantification of associations between genotypes and phenotypes with Bayesian inference and statistical learning techniques

Genetic association studies are an essential tool for studying the relationship between genotypes and phenotypes. With genphen we can quantify the association between genotypes and phenotypes using a hybrid method which uses statistical learning techniques such as random forest and support vector machines, and Bayesian inference using hierarchical models.

Getting started

Package details

AuthorSimo Kitanovski
Bioconductor views Bayesian Classification FeatureExtraction Genetics GenomeWideAssociation Regression SequenceMatching Sequencing SupportVectorMachine
MaintainerSimo Kitanovski <[email protected]>
LicenseGPL (>= 2)
Version1.9.44
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("snaketron/genphen")
snaketron/genphen documentation built on Oct. 27, 2018, 7:05 a.m.