ame_compare_heatmap_methods: Compare AME heatmap methods

View source: R/ame_methods.R

ame_compare_heatmap_methodsR Documentation

Compare AME heatmap methods

Description

This helper function allows the user to visualize the distribution of their AME results data on different scales to help understand the implications of using different values in 'plot_ame_heatmap()'

Usage

ame_compare_heatmap_methods(ame, group, value = -log10(adj.pvalue))

Arguments

ame

ame results data.frame

group

optional name of group to split results by

value

value to compare to "normalize" method (default: -log10(adj.pvalue))

Value

a cowplot 2 panel plot comparing the distribution of 'value' to normalized rank values

Examples

data("example_ame", package = "memes")
ame_compare_heatmap_methods(example_ame$Decreasing)

ame_compare_heatmap_methods(dplyr::bind_rows(example_ame, .id = "type"), type)

snystrom/memes documentation built on Feb. 6, 2023, 2:57 a.m.