importFimo: Import FIMO results
In snystrom/memes: motif matching, comparison, and de novo discovery using the MEME Suite
importFimo R Documentation
Import FIMO results
Description
Import FIMO results
Usage
importFimo(fimo_tsv)
Arguments
fimo_tsv
path to fimo.tsv output file
Value
GenomicRanges object for each match position. Note unless coordinates
are genomic positions, each 'seqnames' entry will be the fasta header, and
start/end will be the position within that sequence of the match.
Examples
fimo_tsv <- system.file("extdata", "fimo.tsv", package = "memes")
importFimo(fimo_tsv)
snystrom/memes documentation built on April 29, 2024, 5:37 p.m.
R Package Documentation
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| importFimo | R Documentation |
Import FIMO results
Description
Import FIMO results
Usage
importFimo(fimo_tsv)
Arguments
fimo_tsv |
path to fimo.tsv output file |
Value
GenomicRanges object for each match position. Note unless coordinates are genomic positions, each 'seqnames' entry will be the fasta header, and start/end will be the position within that sequence of the match.
Examples
fimo_tsv <- system.file("extdata", "fimo.tsv", package = "memes")
importFimo(fimo_tsv)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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