importStremeXML: Import Streme output from previous run
In snystrom/memes: motif matching, comparison, and de novo discovery using the MEME Suite
importStremeXML R Documentation
Import Streme output from previous run
Description
Import Streme output from previous run
Usage
importStremeXML(streme_xml_path)
Arguments
streme_xml_path
path to streme.xml file
Value
data.frame with statistics for each discovered motif. The 'motifs'
column contains a universalmotif object representation in PCM format of
each DREME motif. If no motifs are discovered, returns NULL.
See Also
[runStreme()]
Examples
streme_xml <- system.file("extdata", "streme.xml", package = "memes")
importStremeXML(streme_xml)
snystrom/memes documentation built on Feb. 6, 2023, 2:57 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| importStremeXML | R Documentation |
Import Streme output from previous run
Description
Import Streme output from previous run
Usage
importStremeXML(streme_xml_path)
Arguments
streme_xml_path |
path to streme.xml file |
Value
data.frame with statistics for each discovered motif. The 'motifs' column contains a universalmotif object representation in PCM format of each DREME motif. If no motifs are discovered, returns NULL.
See Also
[runStreme()]
Examples
streme_xml <- system.file("extdata", "streme.xml", package = "memes")
importStremeXML(streme_xml)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.