snystrom/memes: motif matching, comparison, and de novo discovery using the MEME Suite

A seamless interface to the MEME Suite family of tools for motif analysis. 'memes' provides data aware utilities for using GRanges objects as entrypoints to motif analysis, data structures for examining & editing motif lists, and novel data visualizations. 'memes' functions and data structures are amenable to both base R and tidyverse workflows.

Getting started

Package details

Bioconductor views DataImport FunctionalGenomics GeneRegulation MotifAnnotation MotifDiscovery SequenceMatching Software
LicenseMIT + file LICENSE
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
snystrom/memes documentation built on May 8, 2022, 9:53 p.m.