sofpn/rprimer: Design Degenerate Oligos from a Multiple DNA Sequence Alignment
Functions, workflow and a Shiny application for visualizing sequence conservation and designing degenerate primers, probes, and (RT)-(q/d)PCR assays from a multiple DNA sequence alignment. The results can be presented in data frame format and visualized as dashboard-like plots. For more information, please see the package vignette.
Getting started
Browse package contents
Package details |
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|---|---|
| Bioconductor views | Alignment Coverage MultipleSequenceAlignment SequenceMatching ddPCR qPCR |
| Maintainer | |
| License | GPL-3 |
| Version | 1.9.1 |
| URL | https://github.com/sofpn/rprimer |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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