estimatePointClustering: Computes a point estimate (using MAXPEAR method) for...

In sohrabsa/ddclone: Joint statistical inference of clonal populations from single cell and bulk tumour sequencing data

Description

Computes a point estimate (using MAXPEAR method) for clustering of the mutations from the results of a ddClone analysis run

Usage

estimatePointClustering(expPath, MCMCOptions = list(thinning = 10, burnIn =
  100))

Arguments

expPath	path to the directory where the ddClone results are stored
MCMCOptions	a listing containing MCMC options including thinning and burnIn to be used.

Value

A matrix each row of which is a point estimate of clustering assignment for each mutation. See mcclust::maxpear for more details.

sohrabsa/ddclone documentation built on May 30, 2019, 6:08 a.m.