Description Usage Arguments Details
View source: R/tuning_proposals.R
A wrapper function for direct_optimise_replicates to standarize output for simulations.
1 2 3 | fixed_lambda_mle(fct_list, starts = data.frame(alpha = c(0.01, 0.01),
delta = c(0.01, 1e-04)), lambda = 0, multiplier = 20,
c_seq_length = 96, ...)
|
fct_list |
A list of frequency count tables, assumed to be biological replicates. |
starts |
Starting values for |
lambda |
The fixed lambda value to run the MLE procedure with. |
multiplier |
The upper bound of the grid of candidate C values, stated in terms of a multiple of the maximum observed richess (c). For example if c is 50 and multiplier is 10, the method evaluates the likelihood in a C grid from 50 to 500. |
c_seq_len |
The number of points in the C grid. |
A wrapper function for direct_optimise_replicates to standarize output for simulations.
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