API for stemangiola/sccomp
Robust Outlier-aware Estimation of Composition and Heterogeneity for Single-cell Data
| Global functions | |
|---|---|
| .subset | Source code |
| add_attr | Source code |
| as_matrix | Source code |
| check_columns_exist | Source code |
| check_if_any_NA | Source code |
| check_if_columns_right_class | Source code |
| check_if_count_integer | Source code |
| check_if_within_posterior | Source code |
| counts_obj | Man page |
| dirichlet_multinomial_glm | Source code |
| fit_model_and_parse_out_missing_data | Source code |
| fit_model_and_parse_out_no_missing_data | Source code |
| fit_to_counts_rng | Source code |
| formula_to_random_effect_formulae | Source code |
| get_mean_precision | Source code |
| get_mean_precision_association | Source code |
| get_specific_annotation_columns | Source code |
| glm_dirichlet_multinomial | Man page |
| glm_dirichlet_multinomial_generate_quantities | Man page |
| glm_dirichlet_multinomial_imputation | Man page |
| glm_multi_beta | Man page Source code |
| glm_multi_beta_generate_data | Man page |
| gt | Source code |
| ifelse_pipe | Source code |
| multi_beta_glm | Man page Source code |
| multipanel_theme | Man page |
| not | Source code |
| parse_formula | Source code |
| parse_formula_random_intercept | Source code |
| plot.sccomp_tbl | Man page |
| plot_summary | Man page Source code |
| sccomp | Man page |
| sccomp-package | Man page |
| sccomp_boxplot | Man page |
| sccomp_estimate | Man page Source code |
| sccomp_estimate.DFrame | Source code |
| sccomp_estimate.Seurat | Source code |
| sccomp_estimate.SingleCellExperiment | Source code |
| sccomp_estimate.data.frame | Source code |
| sccomp_glm | Man page Source code |
| sccomp_glm.DFrame | Source code |
| sccomp_glm.Seurat | Source code |
| sccomp_glm.SingleCellExperiment | Source code |
| sccomp_glm.data.frame | Source code |
| sccomp_glm_data_frame_counts | Source code |
| sccomp_glm_data_frame_raw | Source code |
| sccomp_predict | Man page |
| sccomp_remove_outliers | Man page Source code |
| sccomp_remove_outliers.sccomp_tbl | Source code |
| sccomp_remove_unwanted_variation | Man page |
| sccomp_replicate | Man page |
| sccomp_test | Man page |
| sce_obj | Man page |
| seurat_obj | Man page |
| simulate_data | Man page |
| st | Source code |
| test_contrasts | Man page Source code |
| vb_iterative | Source code |
