README.md

In steverozen/PCAWG7: Repository of Data from paper 'The repertoire of Mutational Signatures in Human Cancer'

PCAWG7

Purpose

Contains data from the paper by Alexandrov, Kim, Haradhvala, Huang et al., ‘The repertoire of Mutational Signatures in Human Cancer’ https://doi.org/10.1038/s41586-020-1943-3. Please see ?PCAWG7. The funny name comes from the fact that this paper was generated by Working Group 7 of the Pan Cancer Analysis of Whole Genomes (PCAWG) consortium. The data were then placed on the COSMIC web site and subsequently updated.

Installation

Latest stable version

if (!requireNamespace("remotes", quietly = TRUE)) {
  install.packages("remotes")
}
remotes::install_github(repo = "steverozen/PCAWG7")

Get the development version

To use new features in the development version, you can install PCAWG7 from the master branch on GitHub, which may not be stable:

if (!requireNamespace("remotes", quietly = TRUE)) {
  install.packages("remotes")
}
remotes::install_github(repo = "steverozen/PCAWG7", ref = "master")

Reference manual

https://github.com/steverozen/PCAWG7/blob/v0.1.3-branch/data-raw/PCAWG7_0.1.3.pdf

steverozen/PCAWG7 documentation built on Feb. 2, 2022, 5:40 a.m.