Description Usage Arguments Value
View source: R/regression_plots.R
Tools for visualizing gene signals for one given gene with the gam framework.
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data |
a |
gene |
character, a gene of interest. |
reg.f |
a function to perform regression, either "ns" for natural splines, "loess" or "s" (default is "loess"). |
span |
numeric, a smoothing parameter for the regression function (default is 0.75, see |
s.df |
numeric, a smoothing parameter for the nsplines regregression (default is 4, see |
regression |
logical, if the loess regression is to be computed and plotted or not (default is TRUE). |
null.model |
logical, if the null model is to be computed and plotted or not (default is TRUE). |
npred |
logical, if the unshared part of the data is to be plotted or not(default is FALSE). |
legend.show |
logical, if the legend is wanted (default is FALSE). |
returns
pl
,the visualization of the data
regs
, the regression objects for both lineages and the null model.
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