Y: An example single cell count expression matrix (Yan)

In suke18/FEAST: FEAture SelcTion (FEAST) for Single-cell clustering

Description

Y is a count expression matrix which belongs to "matrix" class. The data includes 124 cells about human preimplantation embryos and embryonic stem cells. It contains 19304 genes after removing genes with extreme high dropout rate.

Usage

data("Yan")

Format

An object of "matrix" class contains the count expressions

Source

https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE36552

References

Yan, Liying, et al. "Single-cell RNA-Seq profiling of human preimplantation embryos and embryonic stem cells." Nature structural & molecular biology 20.9 (2013): 1131.

Examples

data("Yan")
Y[1:10, 1:4]

suke18/FEAST documentation built on Sept. 14, 2021, 12:22 a.m.