README.md
In svilsen/STRMPS: Analysis of Short Tandem Repeat (STR) Massively Parallel Sequencing (MPS) Data
STRMPS
The STRMPS package is designed to extract and collect the short tandem repeat (STR) information from the fastq files produced by massively parallel sequencing (MPS).
Installation
The STRMPS-package depends on R (>= 4.4), methods, utils, tidyr, tibble, dplyr, stringr, purrr, parallel, as well as the bioconductor packages Biostrings, pwalign, ShortRead, and IRanges. Version 0.5.8 is available on CRAN, but to get the newest version devtools is needed to install the package from github.
From R, run the following commands:
install.packages("devtools")
devtools::install_github("svilsen/STRMPS")
License
This project is licensed under the MIT License.
svilsen/STRMPS documentation built on Feb. 22, 2025, 4:51 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
STRMPS
The STRMPS package is designed to extract and collect the short tandem repeat (STR) information from the fastq files produced by massively parallel sequencing (MPS).
Installation
The STRMPS-package depends on R (>= 4.4), methods, utils, tidyr, tibble, dplyr, stringr, purrr, parallel, as well as the bioconductor packages Biostrings, pwalign, ShortRead, and IRanges. Version 0.5.8 is available on CRAN, but to get the newest version devtools is needed to install the package from github.
From R, run the following commands:
install.packages("devtools")
devtools::install_github("svilsen/STRMPS")
License
This project is licensed under the MIT License.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.