API for syounkin/RVsharing
Probability of Sharing Rare Variants among Relatives
| Global functions | |
|---|---|
| .onAttach | Source code |
| ComputeKinshipPropCoef | Man page |
| ComputeKinshipPropCoef,RVsharingProb-method | Man page |
| GeneDrop | Man page |
| GeneDrop,Trio,numeric-method | Man page |
| GeneDropSim.allsubsets.fn | Man page Source code |
| GeneDropSim.fn | Man page Source code |
| GeneDropSimExcessSharing.fn | Man page Source code |
| PFU.direct | Source code |
| PFU.direct.cubic | Source code |
| PFU.direct.order4 | Source code |
| RVgene | Man page Source code |
| RVgene_allshare | Man page Source code |
| RVsharing | Man page |
| RVsharing,character,character,character,character-method | Man page |
| RVsharing,character,character,character,missing-method | Man page |
| RVsharing,numeric,numeric,numeric,missing-method | Man page |
| RVsharing,numeric,numeric,numeric,numeric-method | Man page |
| RVsharing,pedigree,missing,missing,character-method | Man page |
| RVsharing,pedigree,missing,missing,missing-method | Man page |
| RVsharing.fn | Source code |
| RVsharing.ped | Source code |
| RVsharing.ped.pshare | Source code Source code |
| RVsharingProb | Man page |
| RVsharingProb-class | Man page |
| Trio | Man page |
| Trio-class | Man page |
| class:RVsharingProb | Man page |
| class:Trio | Man page |
| compute.phi.vec | Source code |
| ex.ped.mat | Man page |
| extract_carriers | Source code |
| gene.drop.fn | Source code |
| get.LODallshare | Source code |
| get.fd.indices | Source code |
| get.psubset | Man page Source code |
| infer.nalleles | Source code |
| infer.theta | Source code |
| infer.theta.cubic | Source code |
| infer.theta.order4 | Source code |
| infer.theta.order5 | Source code |
| infer.theta.quadratic | Source code |
| ped.list | Man page |
| ped2trio | Man page Source code |
