PlotTimeSeries: Time series plot

In sysbioTurin/connector: Fitting and clustering of longitudinal data

Time series plot

Description

Generates the line plot of the time series data. The curves are colored with respect to the feature chosen by the user and/or reported in the AnnotationFile.

Usage

PlotTimeSeries(data, feature, labels = NULL, save = FALSE, path = NULL)

Arguments

data	CONNECTORList. (see DataImport)
feature	The column name reported in the AnnotationFile containing the feature to be investigated.
labels	The vector containing the text for the axis names and plot title.
save	If TRUE then the plot is saved into a pdf file.
path	The folder path where the plot will be saved. If it is missing, the plot is saved in the current working directory.

Value

PlotTimeSeries returns a list containing the line plot as ggplot object, namely PlotTimeSeries_plot, and data, i.e. the CONNECTORList.

Author(s)

Cordero Francesca, Pernice Simone, Sirovich Roberta

Examples

GrowDataFile<-"data/745dataset.xls"
AnnotationFile <-"data/745info.txt"

CONNECTORList <- DataImport(TimeSeriesFile,AnnotationFile)

PlotTimeSeries(CONNECTORList,"Progeny",labels=c("Time","Volume","Tumor Growth"))

sysbioTurin/connector documentation built on April 9, 2024, 12:10 p.m.