Spline.plots: Return the plots of the spline exploited to fit and cluster...

In sysbioTurin/connector: Fitting and clustering of longitudinal data

Return the plots of the spline exploited to fit and cluster the samples.

Description

Returns the Cubic Spline plots from the ClusterWithMeanCurve output list (see ClusterWithMeanCurve). Each plot shows (i) in blue the sample curve, (ii) in red the cubic spline estimated from the FCM, (iii) in black the correspondive cluster mean curve, and finally (iv) the grey area represents the confidence interval.

Usage

Spline.plots(
  FCM.plots,
  All = TRUE,
  SampleNumber = NULL,
  save = FALSE,
  path = NULL
)

Arguments

FCM.plots	CONNECTORList obtained from the ClusterWithMeanCurve function. (see ClusterWithMeanCurve)
All	If TRUE then all the plots, for each sample curve, are saved.
SampleNumber	The number/vector of the sample ID(s) referring to the curve(s) that will be saved.
save	If TRUE then the spline plots are saved (a pdf file will be generated for each curve).
path	The folder path where the plot(s) will be saved. If it is missing, the plot is saved in the current working directory.

Author(s)

Cordero Francesca, Pernice Simone, Sirovich Roberta

sysbioTurin/connector documentation built on April 9, 2024, 12:10 p.m.