syspremed/exploBATCH: Explore batch effect (exploBATCH) is a package for discovering and correcting for batch effect using an approach in Nyamundanda et al (2016).

It contains R scripts for performing formal statistical tests to diagnose batch effect in large scale genomic datasets, and correct for batch effect using an approach detailed in Nyamundanda et al (2016), which is based on the PPCCA model,in large scale genomic datasets. License: What license is it under?

Getting started

Package details

AuthorGift Nyamundanda [email protected]
MaintainerGift Nyamundanda <[email protected]>
License
Version1.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("syspremed/exploBATCH")
syspremed/exploBATCH documentation built on April 4, 2018, 6:54 a.m.