glue_bowtie_bamsort: Map with bowtie and output a sorted bam file
In t-arae/ngscmdr:
Description
Map with bowtie and output a sorted bam file
Usage
1
2
glue_bowtie_bamsort(head_label, index_name, in_dir = "./fastq",
out_dir = "./mapped_by_bowtie", core_num = 2)
Arguments
head_label
.tar file path
index_name
.tar file path
in_dir
.tar file path
out_dir
.tar file path
core_num
number of threads to use
t-arae/ngscmdr documentation built on Sept. 23, 2019, 5:45 a.m.
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Description
Map with bowtie and output a sorted bam file
Usage
1 2 | glue_bowtie_bamsort(head_label, index_name, in_dir = "./fastq",
out_dir = "./mapped_by_bowtie", core_num = 2)
|
Arguments
head_label |
.tar file path |
index_name |
.tar file path |
in_dir |
.tar file path |
out_dir |
.tar file path |
core_num |
number of threads to use |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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