Map with STAR and output a sorted bam file
1 2 3 | glue_pe_star_bamsort(head_label, in_dir = "./fastq",
out_dir = "./mapped_by_star", idx_dir = "./idx_star",
gff_path = "TAIR10_GFF3_genes_transposons.gff", core_num = 4)
|
head_label |
sample label |
in_dir |
A path of directory which contains input files |
out_dir |
A path of directory for saving output files |
idx_dir |
directory path for the indexing output |
gff_path |
.tar file path |
core_num |
number of cpu core |
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