DMRPromoter: Extraction of DMR associated promoter
In takahirosuzuki0626/mTFTarget:
Description
Usage
Arguments
Value
Description
This function extract a promoter horboring DMR
Gene model used in this function is Gencode_hg19(gene only)
Promoter is defined as 1.5kbp upstream and 500 bp downstream from TSS
Usage
1
DMRPromoter(sig_targets_gr)
Arguments
sig_targets_gr
a Granges object
Value
a GRanges object of DMR horboring genes at their promoter
takahirosuzuki0626/mTFTarget documentation built on Jan. 4, 2022, 9:44 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value
Description
This function extract a promoter horboring DMR Gene model used in this function is Gencode_hg19(gene only) Promoter is defined as 1.5kbp upstream and 500 bp downstream from TSS
Usage
1 | DMRPromoter(sig_targets_gr)
|
Arguments
sig_targets_gr |
a Granges object |
Value
a GRanges object of DMR horboring genes at their promoter
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.