gh_bed: GeneHancer bed-like format object

Description Usage Format Examples

Description

This data comes from GeneHancer database, https://academic.oup.com/database/article/doi/10.1093/database/bax028/3737828. The data are integrated human enhancer data set and gene connection of each enhancer. The original data is downloaded from https://genecardsdata.blob.core.windows.net/public/GeneHancer_version_4_4.xlsx The header was removed and stored as tab-deleted gff3-like format file. The gff3-like format file was forther converted to a bed format file, then liftover from hg38 to hg19. the hg19 bed format file was loaded by R as gh_bed.

Usage

1

Format

A bed-like object

Examples

1

takahirosuzuki0626/mTFTarget documentation built on Jan. 4, 2022, 9:44 a.m.