API for tallulandrews/M3D
Michaelis-Menten Modelling of Dropouts in single-cell RNASeq
| Global functions | |
|---|---|
| BrenneckeGetVariableGenes | Man page |
| Consensus_FS | Man page |
| M3DropCleanData | Man page |
| M3DropConvertData | Man page |
| M3DropDropoutModels | Man page |
| M3DropExpressionHeatmap | Man page |
| M3DropFeatureSelection | Man page |
| M3DropGetExtremes | Man page |
| M3DropGetHeatmapClusters | Man page Man page |
| M3DropGetHeatmapNames | Man page |
| M3DropGetMarkers | Man page |
| M3DropSimulationTrifecta | Man page |
| M3DropTestShift | Man page |
| M3DropThreeSetVenn | Man page |
| NBumiCheckFit | Man page |
| NBumiCheckFitFS | Man page |
| NBumiCoexpression | Man page |
| NBumiCompareModels | Man page |
| NBumiConvertData | Man page |
| NBumiConvertToInteger | Man page |
| NBumiFeatureSelectionCombinedDrop | Man page |
| NBumiFeatureSelectionHighVar | Man page |
| NBumiFitBasicModel | Man page |
| NBumiFitDispVsMean | Man page |
| NBumiFitModel | Man page |
| NBumiHVG | Man page |
| NBumiImputeNorm | Man page |
| NBumiSimulationTrifecta | Man page |
| PoissonUMIFeatureSelectionDropouts | Man page |
| bg__MakeSimDE | Man page |
| bg__MakeSimDVar | Man page |
| bg__MakeSimData | Man page |
| bg__MakeSimHVar | Man page |
| bg__add_model_to_plot | Man page |
| bg__calc_variables | Man page |
| bg__default_mean2disp | Man page |
| bg__dropout_plot_base | Man page |
| bg__expression_heatmap | Man page |
| bg__filter_cells | Man page |
| bg__fit_MM | Man page |
| bg__fit_ZIFA | Man page |
| bg__fit_gamma | Man page |
| bg__fit_logistic | Man page |
| bg__fit_size_to_var | Man page |
| bg__fitdispersion | Man page |
| bg__get_extreme_residuals | Man page |
| bg__get_mean2disp | Man page |
| bg__get_stats | Man page |
| bg__highlight_genes | Man page |
| bg__horizontal_residuals_MM_log10 | Man page |
| bg__m3dropTraditionalDE | Man page |
| bg__m3dropTraditionalDEShiftDisp | Man page |
| bg__nbumiGroupDE | Man page |
| bg__shift_size | Man page |
| bg__test_DE_K_equiv | Man page |
| bg__var_vs_drop | Man page |
| corFS | Man page |
| giniFS | Man page |
| irlbaPcaFS | Man page |
| obsolete__nbumiFeatureSelectionDropouts | Man page |
| obsolete__nbumiFeatureSelectionHighVarDist2Med | Man page |
