convert_10x_peak_names_to_misha_intervals: Convert 10X-format peak names to misha intervals
In tanaylab/misha.ext: A home to functions that extend the misha package
convert_10x_peak_names_to_misha_intervals R Documentation
Convert 10X-format peak names to misha intervals
Description
Convert 10X-format peak names to misha intervals
Usage
convert_10x_peak_names_to_misha_intervals(pn)
Arguments
pn
peak names as generated by 10X ATAC pipeline ("chr-start-end" format)
Value
intervals - the peak names converted to misha-compatible intervals
Examples
## Not run:
pn <- rownames(my_scatac_mat)
my_intervals <- convert_10x_peak_names_to_misha_intervals(pn)
## End(Not run)
tanaylab/misha.ext documentation built on Sept. 18, 2024, 2:53 a.m.
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| convert_10x_peak_names_to_misha_intervals | R Documentation |
Convert 10X-format peak names to misha intervals
Description
Convert 10X-format peak names to misha intervals
Usage
convert_10x_peak_names_to_misha_intervals(pn)
Arguments
pn |
peak names as generated by 10X ATAC pipeline ("chr-start-end" format) |
Value
intervals - the peak names converted to misha-compatible intervals
Examples
## Not run:
pn <- rownames(my_scatac_mat)
my_intervals <- convert_10x_peak_names_to_misha_intervals(pn)
## End(Not run)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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