API for taowenmicro/ggClusterNet
| Global functions | |
|---|---|
| ArtifCluster | Man page Source code |
| Facet.line.plot | Source code |
| Facet.network | Source code |
| MatCorPlot | Man page Source code |
| MatCorPlot2 | Man page Source code |
| MetalTast | Source code |
| Miccorplot | Source code |
| Miccorplot2 | Source code |
| Miccorplot3 | Source code |
| PolyRdmNotdCirG | Man page Source code |
| PolygonClusterG | Man page Source code |
| PolygonMaptreeG | Man page Source code |
| PolygonModsquareG | Man page Source code |
| PolygonRrClusterG | Man page Source code |
| Robustness.Random.removal | Source code |
| Robustness.Random.removal.2 | Source code |
| Robustness.Random.removal.ts | Source code |
| Robustness.Targeted.removal | Source code |
| Robustness.Targeted.removal.2 | Source code |
| Robustness.Targeted.removal.ts | Source code |
| Vulnerability.micro | Source code |
| ZS.net.module | Source code |
| ZiPiPlot | Man page Source code |
| add.id.facet | Source code |
| alpha | Source code |
| among_module_connectivity | Source code |
| assign_module_roles | Source code |
| barMainplot | Source code |
| cg.Rownm.ps | Source code |
| change.OTU.name.ps | Source code |
| change.rank.name | Source code |
| changeSamplenames | Source code |
| cir.maptree2 | Source code |
| cir.squ | Source code Source code |
| collinkh | Source code |
| collinkh2 | Source code |
| collinkhx | Source code |
| collinkhx2 | Source code |
| community.stability | Source code |
| community.stability.ts | Source code |
| corBionetwork | Man page Source code |
| corBionetwork.st | Source code |
| corBiostripe | Man page Source code |
| corBiostripeBig | Man page Source code |
| corMicro | Man page Source code |
| cor_Big_micro | Man page Source code |
| cor_Big_micro2 | Man page Source code |
| cor_env_ggcorplot | Source code |
| cor_heat | Source code |
| cor_link | Source code |
| cor_link.dat | Source code |
| cor_link.two | Source code |
| cor_link2 | Source code |
| cor_link3 | Source code |
| cor_linkj | Source code |
| cor_linkx | Source code |
| culculate_node_axis | Man page Source code |
| data.module.Facet.line | Source code |
| div_culculate | Man page Source code |
| div_network | Man page Source code |
| edgeBuild | Man page Source code |
| facet.zipi | Source code Source code |
| filter_OTU_ps | Man page Source code |
| filter_OTU_ps2 | Man page Source code |
| find_N | Source code |
| find_N2 | Source code |
| find_only_in_1 | Source code |
| find_only_in_2 | Source code |
| find_overlap | Source code |
| fisher_test | Source code |
| get_lower_tri | Source code |
| get_upper_tri | Source code |
| ggflower | Man page Source code |
| grobal_pro_compare | Source code |
| group_layout | Source code |
| hub_mantel.env | Source code |
| info.centrality.network | Source code |
| info.centrality.vertex | Source code |
| inputMicro | Man page Source code |
| keystone.barMainplot | Source code |
| keystone.micro | Source code |
| layout.forceatlas2 | Source code |
| line.across.facets.network | Source code |
| line.across.facets.network0 | Source code |
| line.across.facets.network2 | Source code |
| make_igraph | Source code |
| matcorplotj | Source code |
| merge.ps | Source code |
| merge16S_ITS | Source code |
| mergePs_Top_micro | Source code |
| merge_amp.dat | Source code |
| merge_micro | Source code |
| model_Gephi.2 | Man page Source code |
| model_Gephi.3 | Source code |
| model_compare | Source code |
| model_compare.net | Source code |
| model_filled_circle | Source code |
| model_igraph | Man page Source code |
| model_igraph2 | Man page Source code |
| model_maptree | Man page Source code |
| model_maptree2 | Man page Source code |
| model_maptree_group | Source code |
| modulGroup | Man page Source code |
| module.compare.m | Source code |
| module.compare.m.ts | Source code |
| module.compare.net.pip | Source code |
| module.cor.env | Source code |
| module.cor.netproperties | Source code |
| module.roles | Man page Source code |
| module_abundance | Source code |
| module_alpha | Source code |
| module_composition | Source code |
| module_display | Source code |
| module_display.2 | Source code |
| multi.heap | Source code |
| natural.con.micro | Source code |
| natural.con.microp | Source code |
| natural.con.microp.ts | Source code |
| nc | Source code |
| negative.correlation.ratio | Source code |
| negative.correlation.ratio.ts | Source code |
| net.pro.ts | Source code |
| net.property.module.env | Source code |
| net_properties | Man page Source code |
| net_properties.2 | Source code |
| net_properties.2.rm | Source code |
| net_properties.3 | Source code |
| net_properties.4 | Source code |
| netproperties.sample | Source code |
| network | Man page Source code |
| network.2 | Man page Source code |
| network.2.g | Man page Source code |
| network.3 | Source code |
| network.efficiency | Source code |
| network.i | Man page Source code |
| network.pip | Man page Source code |
| network_degree | Source code |
| node.edge | Source code Source code |
| nodeEdge | Man page Source code |
| node_properties | Man page Source code |
| nodeadd | Man page Source code |
| out.ps.data | Source code |
| outputgephi | Man page Source code |
| participation_coeffiecient | Source code |
| plot_roles | Source code |
| plot_roles2 | Source code |
| ps.group.mean | Source code |
| ps.group.mean2 | Source code |
| ps_merge_Tax | Man page Source code |
| ranSNEClusterG | Man page Source code |
| rand.remov.once | Man page Source code |
| rand.remov2.once | Source code |
| random.add.ps | Source code |
| randomClusterG | Man page Source code |
| random_Net | Source code |
| random_Net_compate | Source code |
| rank.network | Source code |
| remove.zero | Source code |
| remove_decimal | Source code Source code |
| remove_rankID | Source code |
| reorder_cor_and_p | Source code |
| reorder_cormat | Source code |
| rm.low.area | Source code |
| rmsimu2 | Source code |
| rmsimuk | Source code |
| rowCV | Source code |
| rowSD | Source code |
| scale_micro | Man page Source code |
| scale_omics | Source code |
| select.otu.g | Source code |
| selectlayout | Source code |
| sparcc.micro | Source code |
| square_points | Source code Source code |
| subset_samples.wt | Source code |
| subset_taxa.wt | Source code |
| subset_taxa.wt2 | Source code |
| sz.node | Source code Source code |
| tax_glom_wt | Man page Source code |
| tax_glom_wt.2 | Source code |
| tax_glom_wt.3 | Source code |
| tax_glom_wt.upper | Source code |
| tax_glom_wtTop | Man page Source code |
| total_layout | Source code |
| two.cor | Source code |
| two.cor2 | Source code |
| vegan_otu | Man page Source code |
| vegan_tax | Man page Source code |
| within_module_degree | Source code |
| zipi.keystone.cor.env | Source code |
| zscore | Source code |
