ps_merge_Tax: Stacked histograms add error bars, marked by significance
In taowenmicro/ggClusterNet:
ps_merge_Tax R Documentation
Stacked histograms add error bars, marked by significance
Description
Stacked histograms add error bars, marked by significance
Usage
ps_merge_Tax(ps = ps, j = "Phylum", Top = 10)
Arguments
ps
a object of phyloseq
j
rank of tax
Top
top number of number selected
errbar
add a distinctive label, TRUE or FEASE could be selected
result
output from aovMcomper or KwWlx. You can also import result calculated from other software (a data frame)
add_abc
add sig abc T or F
Value
list
Author(s)
Contact: Tao Wen 2018203048@njau.edu.cn Jun Yuan junyuan@njau.edu.cn PengHao Xie 2019103106@njau.edu.cn
References
Yuan J, Zhao J, Wen T, Zhao M, Li R, Goossens P, Huang Q, Bai Y, Vivanco JM, Kowalchuk GA, Berendsen RL, Shen Q
Root exudates drive the soil-borne legacy of aboveground pathogen infection
Microbiome 2018,DOI: doi: 10.1186/s40168-018-0537-x
Examples
ps_merge_Tax (ps = ps,j = "Phylum",Top = 10)
taowenmicro/ggClusterNet documentation built on March 29, 2024, 1:32 a.m.
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| ps_merge_Tax | R Documentation |
Stacked histograms add error bars, marked by significance
Description
Stacked histograms add error bars, marked by significance
Usage
ps_merge_Tax(ps = ps, j = "Phylum", Top = 10)
Arguments
ps |
a object of phyloseq |
j |
rank of tax |
Top |
top number of number selected |
errbar |
add a distinctive label, TRUE or FEASE could be selected |
result |
output from aovMcomper or KwWlx. You can also import result calculated from other software (a data frame) |
add_abc |
add sig abc T or F |
Value
list
Author(s)
Contact: Tao Wen 2018203048@njau.edu.cn Jun Yuan junyuan@njau.edu.cn PengHao Xie 2019103106@njau.edu.cn
References
Yuan J, Zhao J, Wen T, Zhao M, Li R, Goossens P, Huang Q, Bai Y, Vivanco JM, Kowalchuk GA, Berendsen RL, Shen Q Root exudates drive the soil-borne legacy of aboveground pathogen infection Microbiome 2018,DOI: doi: 10.1186/s40168-018-0537-x
Examples
ps_merge_Tax (ps = ps,j = "Phylum",Top = 10)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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