net_properties: Use the layout in the sne package to calculate the visual...
In taowenmicro/ggClusterNet:
View source: R/net_properties.R
net_properties R Documentation
Use the layout in the sne package to calculate the visual layout of the network
Description
Use the layout in the sne package to calculate the visual layout of the network
Usage
net_properties(igraph)
Arguments
igraph
network
Value
list
Author(s)
Contact: Tao Wen 2018203048@njau.edu.cn Jun Yuan junyuan@njau.edu.cn Penghao Xie 2019103106@njau.edu.cn
References
Yuan J, Zhao J, Wen T, Zhao M, Li R, Goossens P, Huang Q, Bai Y, Vivanco JM, Kowalchuk GA, Berendsen RL, Shen Q
Root exudates drive the soil-borne legacy of aboveground pathogen infection
Microbiome 2018,DOI: doi: 10.1186/s40168-018-0537-x
Examples
# Import network data
data(igraph)
# Computing network related properties：the total number of edges, the number of positive correlation edges, the number of negative correlation edges, the number of vertices...
reslt = net_properties(igraph)
# export file
write.csv(reslt,"netproperties.csv")
taowenmicro/ggClusterNet documentation built on March 29, 2024, 1:32 a.m.
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View source: R/net_properties.R
| net_properties | R Documentation |
Use the layout in the sne package to calculate the visual layout of the network
Description
Use the layout in the sne package to calculate the visual layout of the network
Usage
net_properties(igraph)
Arguments
igraph |
network |
Value
list
Author(s)
Contact: Tao Wen 2018203048@njau.edu.cn Jun Yuan junyuan@njau.edu.cn Penghao Xie 2019103106@njau.edu.cn
References
Yuan J, Zhao J, Wen T, Zhao M, Li R, Goossens P, Huang Q, Bai Y, Vivanco JM, Kowalchuk GA, Berendsen RL, Shen Q Root exudates drive the soil-borne legacy of aboveground pathogen infection Microbiome 2018,DOI: doi: 10.1186/s40168-018-0537-x
Examples
# Import network data
data(igraph)
# Computing network related properties：the total number of edges, the number of positive correlation edges, the number of negative correlation edges, the number of vertices...
reslt = net_properties(igraph)
# export file
write.csv(reslt,"netproperties.csv")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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