Files in tesselle/tabula

Analysis and Visualization of Archaeological Count Data

.Rbuildignore

.gitattributes

.github/.gitignore

.github/CODE_OF_CONDUCT.md .github/CONTRIBUTING.md .github/ISSUE_TEMPLATE/bug_report.md .github/ISSUE_TEMPLATE/custom.md .github/ISSUE_TEMPLATE/feature_request.md .github/pull_request_template.md

.github/workflows/R-CMD-check.yaml

.github/workflows/pkgdown.yaml

.github/workflows/test-coverage.yaml

.gitignore

CITATION.cff

DESCRIPTION

LICENSE.md

NAMESPACE

NEWS.md R/AllClasses.R R/AllGenerics.R R/coerce.R R/data.R R/index_diversity.R R/index_heterogeneity.R R/index_rarefaction.R R/index_richness.R R/index_similarity.R R/index_test.R R/index_turnover.R R/matrigraph.R R/mutators.R R/plot_bertin.R R/plot_diceleraas.R R/plot_diversity.R R/plot_ford.R R/plot_heatmap.R R/plot_matrix.R R/plot_rank.R R/plot_rarefaction.R R/plot_spot.R R/reexport.R R/seriograph.R R/show.R R/statistics.R R/subset.R R/tabula-deprecated.R R/tabula-internal.R R/tabula-package.R R/validate.R R/zzz.R README.Rmd README.md

codecov.yml

codemeta.json

cran-comments.md data-raw/DATASET.R

data-raw/cantabria.csv

data-raw/pueblo.csv

data/aves.rda

data/cantabria.rda

data/pueblo.rda

data/woodland.rda

inst/CITATION

inst/examples/ex-bootstrap.R inst/examples/ex-diceleraas.R inst/examples/ex-diversity.R inst/examples/ex-diversity_old.R inst/examples/ex-matrigraph.R inst/examples/ex-occurrence.R inst/examples/ex-plot_bertin.R inst/examples/ex-plot_diversity.R inst/examples/ex-plot_ford.R inst/examples/ex-plot_heatmap.R inst/examples/ex-plot_rank.R inst/examples/ex-plot_spot.R inst/examples/ex-rarefaction.R inst/examples/ex-resample.R inst/examples/ex-richness.R inst/examples/ex-seriograph.R inst/examples/ex-similarity.R inst/examples/ex-test.R inst/examples/ex-turnover.R

inst/tinytest/_snaps/eppm.rds

inst/tinytest/_snaps/evenness_bootstrap.rds

inst/tinytest/_snaps/evenness_jackknife.rds

inst/tinytest/_snaps/heterogeneity_bootstrap.rds

inst/tinytest/_snaps/heterogeneity_jackknife.rds

inst/tinytest/_snaps/pvi.rds

inst/tinytest/_snaps/rarefaction.rds

inst/tinytest/_snaps/richness_bootstrap.rds

inst/tinytest/_snaps/richness_jackknife.rds

inst/tinytest/_snaps/shannon_test.rds

inst/tinytest/_tinysnapshot/plot_bertin_count.svg

inst/tinytest/_tinysnapshot/plot_bertin_noflip.svg

inst/tinytest/_tinysnapshot/plot_bertin_prop1.svg

inst/tinytest/_tinysnapshot/plot_bertin_prop2.svg

inst/tinytest/_tinysnapshot/plot_bertin_threshold.svg

inst/tinytest/_tinysnapshot/plot_dice_leraas.svg

inst/tinytest/_tinysnapshot/plot_ford_count.svg

inst/tinytest/_tinysnapshot/plot_ford_weights.svg

inst/tinytest/_tinysnapshot/plot_heterogeneity.svg

inst/tinytest/_tinysnapshot/plot_matrigraph.svg

inst/tinytest/_tinysnapshot/plot_matrigraph_reverse.svg

inst/tinytest/_tinysnapshot/plot_mtx_count.svg

inst/tinytest/_tinysnapshot/plot_mtx_incid.svg

inst/tinytest/_tinysnapshot/plot_mtx_notfixed.svg

inst/tinytest/_tinysnapshot/plot_mtx_occ.svg

inst/tinytest/_tinysnapshot/plot_mtx_prop1.svg

inst/tinytest/_tinysnapshot/plot_mtx_prop2.svg

inst/tinytest/_tinysnapshot/plot_mtx_sim.svg

inst/tinytest/_tinysnapshot/plot_rank_log.svg

inst/tinytest/_tinysnapshot/plot_rank_nolegend.svg

inst/tinytest/_tinysnapshot/plot_rarefaction.svg

inst/tinytest/_tinysnapshot/plot_rarefaction_nolegend.svg

inst/tinytest/_tinysnapshot/plot_richness.svg

inst/tinytest/_tinysnapshot/plot_seriograph.svg

inst/tinytest/_tinysnapshot/plot_spot_occ.svg

inst/tinytest/_tinysnapshot/plot_spot_plain.svg

inst/tinytest/_tinysnapshot/plot_spot_prop1.svg

inst/tinytest/_tinysnapshot/plot_spot_prop2.svg

inst/tinytest/_tinysnapshot/plot_spot_ring.svg

inst/tinytest/_tinysnapshot/plot_spot_sim_plain.svg

inst/tinytest/_tinysnapshot/plot_spot_sim_ring.svg

inst/tinytest/helpers.R inst/tinytest/test_diversity.R inst/tinytest/test_index.R inst/tinytest/test_occurrence.R inst/tinytest/test_plots.R inst/tinytest/test_rarefaction.R inst/tinytest/test_richness.R inst/tinytest/test_similarity.R inst/tinytest/test_statistics.R inst/tinytest/test_turnover.R man/CompositionIndex-class.Rd man/DiversityIndex-class.Rd man/EvennessIndex-class.Rd man/HeterogeneityIndex-class.Rd man/RarefactionIndex-class.Rd man/RichnessIndex-class.Rd man/aves.Rd man/bootstrap.Rd man/cantabria.Rd

man/figures/README-ford-1.png

man/figures/README-occurrence-1.png

man/figures/README-sample-size-1.png

man/figures/README-sample-size-2.png

man/figures/logo.png

man/heterogeneity.Rd man/jackknife.Rd man/matrigraph.Rd man/mutators.Rd man/occurrence.Rd man/plot_bertin.Rd man/plot_diceleraas.Rd man/plot_diversity.Rd man/plot_ford.Rd man/plot_heatmap.Rd man/plot_matrix.Rd man/plot_rank.Rd man/plot_rarefaction.Rd man/plot_spot.Rd man/pueblo.Rd man/rarefaction.Rd man/reexports.Rd man/resample.Rd man/richness.Rd man/seriograph.Rd man/similarity.Rd man/simulate.Rd man/tabula-deprecated.Rd man/tabula-package.Rd man/test_diversity.Rd man/turnover.Rd man/woodland.Rd

paper.bib

paper.md

pkgdown/_pkgdown.yml

pkgdown/favicon/apple-touch-icon-120x120.png

pkgdown/favicon/apple-touch-icon-152x152.png

pkgdown/favicon/apple-touch-icon-180x180.png

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pkgdown/favicon/apple-touch-icon.png

pkgdown/favicon/favicon-16x16.png

pkgdown/favicon/favicon-32x32.png

pkgdown/favicon/favicon.ico

revdep/.gitignore

revdep/README.md revdep/cran.md revdep/failures.md revdep/problems.md

tabula.Rproj

tests/tinytest.R vignettes/alpha.Rmd vignettes/beta.Rmd

vignettes/bibliography.bib

tesselle/tabula documentation built on March 4, 2024, 4:41 a.m.