analyses/scripts/R-scripts/Processing/README.md
In thednainus/senegalHIVmodel: Analysis of HIV data from Senegal
treedater_HIV_CGR_byCodon.R
This script was used to carry out treedater analyses for each subtype. It also has some code for checking bootstrapped trees.
merge_trees.R
This script was used to merge each treedater phylogenetic tree as a polytomy. This merged tree was then used in the phylodynamic analyses.
thednainus/senegalHIVmodel documentation built on Oct. 14, 2024, 5:46 a.m.
R Package Documentation
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treedater_HIV_CGR_byCodon.R
This script was used to carry out treedater analyses for each subtype. It also has some code for checking bootstrapped trees.
merge_trees.R
This script was used to merge each treedater phylogenetic tree as a polytomy. This merged tree was then used in the phylodynamic analyses.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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