API for thierrygosselin/stackr
Run stacks software pipeline for RADseq analysis inside R

Global functions
.stackr_parallel Man page
.stackr_parallel_mc Man page
\%>\% Man page
build_stackr_workflow_dir Man page Source code
change_pop_names Man page Source code
check_fq Man page Source code
clean_ind_names Man page Source code
clean_markers_names Man page Source code
clean_pop_names Man page Source code
fq_file_type Man page Source code
list_sample_file Man page Source code
loc_pop_stats Man page Source code
mclapply_win Man page Source code
merge_bam Man page Source code
merge_parallel Man page Source code
mismatch_fig Man page Source code
normalize_reads Man page Source code
onAttach Source code
pi Man page
pi_pop Man page Source code
read_count_one Man page Source code
read_counter Man page Source code
read_stacks_ustacks_log Man page Source code
rename_fq Man page Source code
run_cstacks Man page Source code
run_gstacks Man page Source code
run_populations Man page Source code
run_process_radtags Man page Source code
run_rxstacks Man page Source code
run_sstacks Man page Source code
run_tsv2bam Man page Source code
run_ustacks Man page Source code
separate_haplo Man page Source code
separate_haplo_long Man page Source code
split_bam_list Man page Source code
split_vec_row Man page Source code
stackr_normalize Man page Source code
strata_haplo Man page Source code
summary_catalog_log_lik Man page Source code
summary_genotypes Man page Source code
summary_haplotypes Man page Source code
summary_pstacks Man page Source code
summary_rxstacks Man page Source code
summary_ustacks Man page Source code
write_normalize Man page Source code
thierrygosselin/stackr documentation built on Oct. 14, 2018, 3:03 a.m.