Files in thierrygosselin/stackr
Run stacks software pipeline for RADseq analysis inside R

.DS_Store
.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
NAMESPACE
NEWS.md
R/.DS_Store
R/build_stackr_workflow_dir.R R/global_variables.R R/normalize_reads.R R/read_counter.R R/rename_fq.R R/run_cstacks.R R/run_gstacks.R R/run_populations.R R/run_process_radtags.R R/run_rxstacks.R R/run_sstacks.R R/run_tsv2bam.R R/run_ustacks.R R/stackr_parallel.R R/summary_catalog_log_lik.R R/summary_genotypes.R R/summary_haplotypes.R R/summary_pstacks.R R/summary_rxstacks.R R/summary_ustacks.R R/utils.R README.Rmd README.md
appveyor.yml
inst/CITATION
man/.DS_Store
man/.Rapp.history
man/build_stackr_workflow_dir.Rd man/change_pop_names.Rd man/check_fq.Rd man/clean_ind_names.Rd man/clean_markers_names.Rd man/clean_pop_names.Rd man/fq_file_type.Rd man/list_sample_file.Rd man/loc_pop_stats.Rd man/merge_bam.Rd man/merge_parallel.Rd man/mismatch_fig.Rd man/normalize_reads.Rd man/pi.Rd man/pi_pop.Rd man/pipe.Rd man/read_count_one.Rd man/read_counter.Rd man/read_stacks_ustacks_log.Rd man/rename_fq.Rd man/run_cstacks.Rd man/run_gstacks.Rd man/run_populations.Rd man/run_process_radtags.Rd man/run_rxstacks.Rd man/run_sstacks.Rd man/run_tsv2bam.Rd man/run_ustacks.Rd man/separate_haplo.Rd man/separate_haplo_long.Rd man/split_bam_list.Rd man/split_vec_row.Rd man/stackr_normalize.Rd man/stackr_parallel.Rd man/strata_haplo.Rd man/summary_catalog_log_lik.Rd man/summary_genotypes.Rd man/summary_haplotypes.Rd man/summary_pstacks.Rd man/summary_rxstacks.Rd man/summary_ustacks.Rd man/write_normalize.Rd
stackr.Rproj
vignettes/.DS_Store
vignettes/RADseq_workflow.png
vignettes/stackr_workflow.png
vignettes/vignette_installation_problems.Rmd
vignettes/vignette_installation_problems.html
thierrygosselin/stackr documentation built on July 17, 2018, 4:51 p.m.