calc_k: Calculate the limit of the number of junctions
In thijsjanzen/junctions: The Breakdown of Genomic Ancestry Blocks in Hybrid Lineages
calc_k R Documentation
Calculate the limit of the number of junctions
Description
Calculate the average number of junctions after an infinite
number of generations, provided information on the initial heterozygosity,
population size and the number of generations.
Usage
calc_k(N = Inf, R = Inf, H_0 = 0.5, C = 1)
Arguments
N
population size
R
number of markers
H_0
initial heterozygosity (at the time of admixture)
C
Mean number of crossovers per meiosis (e.g. size in Morgan of
the chromosome)
Value
The number of junctions for at time = infinity
Examples
k <- calc_k(N = 100, R = 1000, H_0 = 0.5, C = 1)
thijsjanzen/junctions documentation built on Feb. 16, 2024, 12:14 p.m.
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| calc_k | R Documentation |
Calculate the limit of the number of junctions
Description
Calculate the average number of junctions after an infinite number of generations, provided information on the initial heterozygosity, population size and the number of generations.
Usage
calc_k(N = Inf, R = Inf, H_0 = 0.5, C = 1)
Arguments
N |
population size |
R |
number of markers |
H_0 |
initial heterozygosity (at the time of admixture) |
C |
Mean number of crossovers per meiosis (e.g. size in Morgan of the chromosome) |
Value
The number of junctions for at time = infinity
Examples
k <- calc_k(N = 100, R = 1000, H_0 = 0.5, C = 1)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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