anansiTranslate: Translate tableY and tableX columns column to human readable...

In thomazbastiaanssen/anansi: Annotation-Based Analysis of Specific Interactions

Translate tableY and tableX columns column to human readable names

Description

helper function for the spinToLong and spinToWide functions.

Usage

anansiTranslate(
  x,
  Y_translation = Y_translation,
  X_translation = X_translation,
  argonansi = FALSE
)

Arguments

x	a table with a feature_Y and feature_X column.
Y_translation	data.frame, a lookup table with featureY names as the first column and human readable names as the second. See cpd_translation for an example file.
X_translation	data.frame, a lookup table with featureX names as the first column and human readable names as the second. See KO_translation for an example file.
argonansi	A boolean. Toggles whether we are dealing with stratified data.

Value

an expanded table with a column for the human readable names for the features in both tableY and tableX.

thomazbastiaanssen/anansi documentation built on Feb. 9, 2025, 2:07 p.m.