Plot the total number of individuals in each disease class
| 1 | 
| pop | A MetapopEpi class object | 
| start | What event to start plotting from. | 
| end | What event to end plotting from. If NULL, plot until end. | 
| S | Logical, controls whether or not to include the susceptible population. | 
| nPath | Logical, Colour the plot by number of pathogens or by class number | 
| o | Logical. Truncate y-axis. | 
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