Files in timcdlucas/MetapopEpi
Functions to run multipathogen, metapopulation epidemiological simulations
.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
LICENSE
NAMESPACE
R/analysisFunctions.R
R/kernels.R
R/makePop.R
R/pathogenDiversity.R
R/plottingFunctions.R
R/print_MetapopEpi.R
R/sizeDistributionModels.R
R/spatialColonyPlacement.R
README.md
inst/manual/basicPathSim.R
man/MetapopEpi.Rd
man/adjMatrix.Rd
man/birthR.Rd
man/checkIfGiant.Rd
man/circleColony.Rd
man/coinfectionR.Rd
man/deathR.Rd
man/dispersalR.Rd
man/edgeList.Rd
man/equalPop.Rd
man/exponentialPop.Rd
man/findCoinfDistr.Rd
man/findDisDistr.Rd
man/findDiseaseAdded.Rd
man/infectionR.Rd
man/infectionTrans.Rd
man/initTransitions.Rd
man/inverseKern.Rd
man/linearKern.Rd
man/makePop.Rd
man/netDegree.Rd
man/netStrength.Rd
man/numComponents.Rd
man/pAll.Rd
man/pClass.Rd
man/pCol.Rd
man/pDis.Rd
man/pInf.Rd
man/pPop.Rd
man/pSI.Rd
man/pSIR.Rd
man/pSus.Rd
man/plotColonyNet.Rd
man/poissonPop.Rd
man/popHeat.Rd
man/popMatrix.Rd
man/randEvent.Rd
man/runSim.Rd
man/seedPathogen.Rd
man/sumI.Rd
man/transRates.Rd
man/uniformColony.Rd
man/unweightedKern.Rd
man/waitingTime.Rd
man/weightMatrix.Rd
tests/test-all.R
tests/testthat/test-OtherExported.R
tests/testthat/test-internalFunctions.R
tests/testthat/test-makePop.R
