timpeters82/DMRcate-release: Illumina 450K methylation array spatial analysis methods
De novo identification and extraction of differentially methylated regions (DMRs) in the human genome using Illumina Infinium HumanMethylation450 BeadChip array data. Provides functionality for filtering probes possibly confounded by SNPs and cross-hybridisation. Includes bedGraph generation, GRanges generation and plotting functions.
Getting started
Browse package contents
Package details |
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| Author | Tim Peters |
| Bioconductor views | DNAMethylation DifferentialExpression DifferentialMethylation GeneExpression Genetics GenomeAnnotation MethylationArray Microarray MultipleComparison OneChannel QualityControl TimeCourse TwoChannel |
| Maintainer | Tim Peters <t.peters@garvan.org.au> |
| License | file LICENSE |
| Version | 1.4.2 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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