Files in tjburns08/Sconify
A toolkit for performing KNN-based statistics for flow and mass cytometry data

.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/data.R R/k.selection.R R/knn.and.statistics.R R/post.processing.R R/process.files.R README.md
data/bz.gmcsf.final.norm.scale.rda
data/bz.gmcsf.final.rda
data/exist.rda
data/funct.markers.rda
data/input.markers.rda
data/markers.rda
data/wand.combined.rda
data/wand.final.rda
data/wand.ideal.k.rda
data/wand.il7.rda
data/wand.scone.rda
inst/NEWS.txt
inst/extdata/Bendall_et_al_Cell_Sample_C_IL7.fcs
inst/extdata/Bendall_et_al_Cell_Sample_C_basal.fcs
inst/extdata/markers.csv
man/AddTsne.Rd man/FcsToTibble.Rd man/Fnn.Rd man/GetKnnDe.Rd man/GetMarkerNames.Rd man/Impute.Rd man/ImputeTesting.Rd man/LogTransformQ.Rd man/MakeHist.Rd man/MakeKnnList.Rd man/MeaningOfLife.Rd man/MultipleDonorStatistics.Rd man/ParseMarkers.Rd man/PostProcessing.Rd man/ProcessMultipleFiles.Rd man/QCorrectionThresholding.Rd man/QuantNormalize.Rd man/QuantNormalizeElements.Rd man/RunStatistics.Rd man/SconeValues.Rd man/SplitFile.Rd man/StringToNumbers.Rd man/SubsampleAndTsne.Rd man/TsneVis.Rd man/bz.gmcsf.final.Rd man/bz.gmcsf.final.norm.scale.Rd man/exist.Rd man/funct.markers.Rd man/input.markers.Rd man/markers.Rd man/wand.combined.Rd man/wand.final.Rd man/wand.ideal.k.Rd man/wand.il7.Rd man/wand.scone.Rd tests/testthat.R tests/testthat/test.file.processing.R tests/testthat/test.k.selection.R tests/testthat/test.knn.and.statistics.R tests/testthat/test.post.processing.R vignettes/DataQuality.Rmd vignettes/FindingIdealK.Rmd vignettes/Step1.PreProcessing.Rmd vignettes/Step2.TheSconeWorkflow.Rmd vignettes/Step3.PostProcessing.Rmd
vignettes/modified.markers.csv.example.png
vignettes/original.markers.csv.example.png
vignettes/sconify_proof_of_concept.png
vignettes/sconify_visual_explanation.png
tjburns08/Sconify documentation built on July 19, 2018, 9:51 a.m.