MQ_summary_MSvsMSMS: View number of MS1 and MS2 spectra per sample from...

In tkostas/viewMQ: Visualization of MaxQuant output files for proteomics studies

Description

Make a side-by-side barplot with the number of MS1 and the number of MS2 scans per sample.

Usage

MQ_summary_MSvsMSMS(x, num_size = 4, num_angle = 0, num_vjust = -0.25,
  num_hjust = 0.5, ylim = c(0, NA))

Arguments

x	The summary.txt file from MaxQuant output.
num_size	Numeric label size. Default value is 4.
num_angle	Numeric label label angle. Default value is 0.
num_vjust	Vertical justification for numeric label. Default value is -0.25.
num_hjust	Horizontal justification for numeric label. Default value is 0.5.
ylim	Y-axis limits. Vector of two elements with default values c(0, NA).

Value

A barplot

tkostas/viewMQ documentation built on May 6, 2019, 6:02 p.m.