add_groups: Add groups based on experiment name.

In tkostas/viewMQ: Visualization of MaxQuant output files for proteomics studies

Description

Add group identifies based on strings included in the Experiments name.

Usage

add_groups(x, group_ids = list(All_samples = "All samples"))

Arguments

x	A dataframe containing a column named Experiments, based on which you will define the groups.
group_ids	List containing group name as name of the list element, and an identifier unique for this group as list element.

Examples

# first define the group_ids list
group_ids <- list(GroupA = "group_A",
                 GroupB = "group_B")
# 2nd assign different experiments into groups. Output is saved in the 'my_groups' column
data2 <- add_groups(data, group_ids)

tkostas/viewMQ documentation built on May 6, 2019, 6:02 p.m.