Files in tpbilton/GUSbase
Genotyping Uncertainty with Sequencing Data: Base Package
.Rbuildignore
.Rprofile
.gitignore
DESCRIPTION
GUSbase.Rproj
LICENSE
NAMESPACE
NEWS.md
R/GUSbase-package.R
R/RA.R
R/UR.R
R/VCFtoRA.R
R/checkVector.R
R/combine.R
R/diagPlot.R
R/dts.R
R/est_functions.R
R/extractVar.R
R/makeRA.R
R/makeUR.R
R/mergeSamples.R
R/readRA.R
R/simDS.R
R/transformations.R
R/wrappers.R
R/writeRA.R
R/writeVCF.R
R/zzz.R
README.md
cleanup.sh
configure
configure.ac
flake.lock
flake.nix
inst/CITATION
inst/REFERENCES.bib
inst/extdata/simDS.vcf
inst/extdata/simDS_metaInfo.csv
inst/extdata/simDS_ped.csv
inst/extdata/simdata.Rdata
man/DiagPlots.Rd
man/GUSbase-package.Rd
man/RA.Rd
man/UR.Rd
man/VCFtoRA.Rd
man/cash-extractVar.Rd
man/cash-mergeSamples.Rd
man/cash-writeRA.Rd
man/cash-writeVCF.Rd
man/makeRA.Rd
man/makeUR.Rd
man/readRA.Rd
man/simDS.Rd
man/transformations.Rd
src/GUSbase.h
src/Makevars.in
src/Makevars.win
src/functions.c
src/functions.h
src/gest_em.c
src/init.c
src/pest.c
src/pest_em.c
src/pest_em_ep.c
test/test.R
test/test2.R
