trias-project/trias
Process Data for the Project Tracking Invasive Alien Species (TrIAS)

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Process Data for the Project Tracking Invasive Alien Species (TrIAS)

.Rbuildignore
.github/.gitignore
.github/CODE_OF_CONDUCT.md .github/CONTRIBUTING.md
.github/workflows/R-CMD-check.yaml
.github/workflows/pkgdown.yaml
.github/workflows/pr-commands.yaml
.github/workflows/test-coverage.yaml
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/apply_decision_rules.R R/apply_gam.R R/categories.R R/climate_match.R R/data-future.R R/data-legends.R R/data-observed.R R/gbif_get_taxa.R R/gbif_has_distribution.R R/gbif_verify_keys.R R/get_cred.R R/get_table_pathways.R R/indicator_introduction_year.R R/indicator_native_range_year.R R/indicator_total_year.R R/pathways_cbd.R R/update_download_list.R R/verify_taxa.R R/visualize_pathways_level1.R R/visualize_pathways_level2.R R/visualize_pathways_year_level1.R R/visualize_pathways_year_level2.R README.Rmd README.md
_pkgdown.yml
codecov.yml
data/future.rda
data/legends.rda
data/observed.rda
man/GBIF_distr_terms.Rd man/apply_decision_rules.Rd man/apply_gam.Rd man/climate_match.Rd
man/figures/logo.png
man/future.Rd man/gbif_get_taxa.Rd man/gbif_has_distribution.Rd man/gbif_verify_keys.Rd man/get_cred.Rd man/get_table_pathways.Rd man/indicator_introduction_year.Rd man/indicator_native_range_year.Rd man/indicator_total_year.Rd man/legends.Rd man/observed.Rd man/pathways_cbd.Rd man/plot_ribbon_em.Rd man/update_download_list.Rd man/verify_taxa.Rd man/visualize_pathways_level1.Rd man/visualize_pathways_level2.Rd man/visualize_pathways_year_level1.Rd man/visualize_pathways_year_level2.Rd tests/testthat.R
tests/testthat/data_test_input_graphs_indicators/test_visualization_df.tsv
tests/testthat/data_test_output_apply_gam/example_gam_taxonKey2876049_p-values_error.tsv
tests/testthat/data_test_output_apply_gam/example_gam_taxonKey2927530_no_gam.tsv
tests/testthat/data_test_output_gbif_get_taxa/gbif_get_taxa_checklist.tsv
tests/testthat/data_test_output_gbif_get_taxa/gbif_get_taxa_checklists.tsv
tests/testthat/data_test_output_gbif_get_taxa/gbif_get_taxa_taxon_key_1_6_numeric.tsv
tests/testthat/data_test_output_gbif_get_taxa/gbif_get_taxa_taxon_key_2_character.tsv
tests/testthat/data_test_output_gbif_get_taxa/gbif_get_taxa_taxon_key_3_numeric.tsv
tests/testthat/data_test_output_gbif_get_taxa/gbif_get_taxa_taxon_key_char_vector.tsv
tests/testthat/data_test_output_gbif_get_taxa/gbif_get_taxa_taxon_key_lim_2.tsv
tests/testthat/data_test_output_verify_taxa/output1_duplicates.tsv
tests/testthat/data_test_output_verify_taxa/output1_new_synonyms.tsv
tests/testthat/data_test_output_verify_taxa/output1_new_unmatched_taxa.tsv
tests/testthat/data_test_output_verify_taxa/output1_outdated_synonyms.tsv
tests/testthat/data_test_output_verify_taxa/output1_outdated_unmatched_taxa.tsv
tests/testthat/data_test_output_verify_taxa/output1_taxa.tsv
tests/testthat/data_test_output_verify_taxa/output1_updated_bb_acceptedName.tsv
tests/testthat/data_test_output_verify_taxa/output1_updated_bb_scientificName.tsv
tests/testthat/data_test_output_verify_taxa/output1_updated_issues.tsv
tests/testthat/data_test_output_verify_taxa/output1_verification.tsv
tests/testthat/data_test_output_verify_taxa/output2_duplicates.tsv
tests/testthat/data_test_output_verify_taxa/output2_new_synonyms.tsv
tests/testthat/data_test_output_verify_taxa/output2_new_unmatched_taxa.tsv
tests/testthat/data_test_output_verify_taxa/output2_outdated_synonyms.tsv
tests/testthat/data_test_output_verify_taxa/output2_outdated_unmatched_taxa.tsv
tests/testthat/data_test_output_verify_taxa/output2_taxa.tsv
tests/testthat/data_test_output_verify_taxa/output2_updated_bb_acceptedName.tsv
tests/testthat/data_test_output_verify_taxa/output2_updated_bb_scientificName.tsv
tests/testthat/data_test_output_verify_taxa/output2_verification.tsv
tests/testthat/data_test_pathways/input_data_pathways.tsv
tests/testthat/data_test_upload_list/gbif_downloads.tsv
tests/testthat/test-gbif_verify_keys.R tests/testthat/test-indicator_introduction_year.R tests/testthat/test-indicator_native_range_year.R tests/testthat/test-indicator_total_year.R tests/testthat/test-input_apply_decision_rules.R tests/testthat/test-input_apply_gam.R tests/testthat/test-input_gbif_get_taxa.R tests/testthat/test-input_gbif_has_distribution.R tests/testthat/test-input_get_table_pathways.R tests/testthat/test-output_apply_decision_rules.R tests/testthat/test-output_apply_gam.R tests/testthat/test-output_gbif_get_taxa.R tests/testthat/test-output_gbif_get_taxa_limit_warnings.R tests/testthat/test-output_gbif_has_distribution.R tests/testthat/test-output_get_table_pathways.R tests/testthat/test-update_download_list.R tests/testthat/test-verify_taxa.R tests/testthat/test-visualize_pathways_level1.R tests/testthat/test-visualize_pathways_level2.R tests/testthat/test-visualize_pathways_year_level1.R tests/testthat/test-visualize_pathways_year_level2.R
trias.Rproj
trias-project/trias documentation built on Sept. 18, 2024, 11:50 a.m.

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