MTHGVS: convert mitochondrial variant calls to HGVS format for naming

In trichelab/MTseeker: Bioconductor Tools for Human Mitochondrial Variant Analysis

Description

convert mitochondrial variant calls to HGVS format for naming

Usage

MTHGVS(x, asMVR = FALSE, verbose = FALSE)

Arguments

x	an MVRanges (or, in a pinch, a GRanges)
asMVR	return a renamed MVRanges? (default is FALSE)
verbose	be yappy? (default is FALSE)

Value

     proper HGVS names for the *Ranges (or a renamed *Ranges)

Examples

library(MTseekerData) 
data(RONKSvariants) 
MTHGVS(RONKSvariants$RO_1)

trichelab/MTseeker documentation built on March 8, 2021, 6:20 p.m.