fixedGroupBatch: Linear model with group and batch effects

Description Usage Arguments Value Examples

View source: R/estimate.R

Description

fixedGroupBatch fits and returns a linear model with log2inty as response, and group and batch as fixed effects.

Usage

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Arguments

df

A data frame with columns log2inty, group, and batch for one PTM site.

Value

An lm model object.

Examples

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x <- data.frame(
    batch=rep(c("1", "2"), each=4),
    group=rep(c("1", "2"), 4),
    log2inty=rep(c(10, 12), 4) + rnorm(8)
)
fixedGroupBatch(x)

tsunghengtsai/MSstatsPTM documentation built on Oct. 4, 2020, 5:51 p.m.