countQcScatterPlots: Adds QC scatter plots

In uzh/ezRun: An R meta-package for the analysis of Next Generation Sequencing Data

Adds QC scatter plots

Description

Adds QC scatter plots to an html file.

Usage

countQcScatterPlots(
  param,
  design,
  conds,
  rawData,
  signalCond,
  isPresentCond,
  types = NULL
)

Arguments

param	a list of parameters.
design	a data.frame containing the factorial design.
conds	a named character vector containing the conditions of the factorial design.
rawData	a list of raw data obtained from loadCountDataset().
signalCond	a set of values containing signals averaged by the conditions.
isPresentCond	Either NULL or a data.frame containing coloring information.
types	a character vector containing the types.
doc	an object of the class bsdoc to add the plots.

Author(s)

Rehrauer, Hubert

Schmid, Peter

uzh/ezRun documentation built on March 5, 2025, 3:41 p.m.