get_seq: Combine list of bases

Description Usage Arguments Value Examples

View source: R/utils.R

Description

Combine list of bases

Usage

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get_seq(raw, upper = TRUE)

Arguments

raw

list of bases

upper

flag on whether the sequence should be returned in all caps

Value

string of bases

Examples

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set.seed(123)
# Generate random list of DNA bases
seq_list <- list(c("A", "C", "G", "T")[sample(1:4, 100, TRUE)])
get_seq(seq_list) 
get_seq(seq_list, FALSE) # Return lower case sequence

villegar/RhAMPseq documentation built on Aug. 12, 2021, 8:47 p.m.