subsample_module_evaluation: Gene module correlation score for multiple clustering results

In vittoriofortino84/COPS: Clustering algorithms for Omics-driven Patient Stratification

Gene module correlation score for multiple clustering results

Description

Runs gene_module_score in parallel.

Usage

subsample_module_evaluation(
  clusters,
  by = c("run", "fold", "datname", "drname", "k", "m"),
  parallel = 1,
  ...
)

Arguments

clusters	A data.table or data.frame with clustering information.
by	Column names that identify a single clustering result.
parallel	Number of parallel threads.
...	Extra arguments are passed to gene_module_score.

Details

Assumes that a parallel backend has been registered for foreach.

Value

data.table

vittoriofortino84/COPS documentation built on Jan. 28, 2025, 3:16 p.m.