compareModels.GrowthTransitionMatrices: Compare growth transition matrices for TCSAM2015 model runs

In wStockhausen/rTCSAM2015: A set of tools to set up input for, and interact with output from, a TCSAM2015 model run, as well as to compare TCSAM2015 and rsimTCSAM runs.

Description

Function to compare growth transition matrices for TCSAM2015 model runs.

Usage

compareModels.GrowthTransitionMatrices(mdfr, nrow = 7, ncol = 5,
  xlab = "post-molt size (mm CW)", ylab = "proportion", xlim = NULL,
  ylim = NULL, ggtheme = ggplot2::theme_grey(), showPlot = FALSE,
  pdf = NULL, width = 8, height = 10, verbose = FALSE)

Arguments

mdfr	- dataframe from call to getMDFR.GrowthTransitionMatrices(...) for n.at.z data
nrow	- number of rows per page for output plots
ncol	- number of columns per page for output plots
ggtheme	- graphical theme for plot
showPlot	- flag to show/print plots immediately
pdf	- name of pdf file to record plot output to
width	- pdf page width (in inches)
height	- pdf page width (in inches)
verbose	- flag (T/F) to print diagnostic output

Details

Plots are produced by sex and parameter combination, and faceted by pre-molt size ('z' column). nrow*ncol determines the maximum number of plots per figure.

Value

recursive list of lists of ggplot2 objects

wStockhausen/rTCSAM2015 documentation built on May 3, 2019, 7:14 p.m.