getMDFR.NatMort: Get natural mortality rates from model results from TCSAM2015...

In wStockhausen/rTCSAM2015: A set of tools to set up input for, and interact with output from, a TCSAM2015 model run, as well as to compare TCSAM2015 and rsimTCSAM runs.

Description

Function to get natural mortality rates from model results from TCSAM2015 and rsimTCSAM model runs as a dataframe.

Usage

getMDFR.NatMort(tcsams = NULL, rsims = NULL, type = c("M_cxm", "M_yxm",
  "M_yxmsz"), verbose = FALSE)

Arguments

tcsams	- single TCSAM2015 model report object, or named list of such
rsims	- single rsimTCSAM results object, or named list of such
type	- flag indicating which M's to extract ('M_cxm', 'M_yxm' or 'M_yxmsz')
verbose	- flag (T/F) to print debug info

Details

Extracts natural mortality rates

Value

dataframe with columns

• 'M_cxm:', 'modeltype', 'model', 'pc', 'x', 'm', 'val'

• 'M_yxm:', 'modeltype', 'model', 'y', 'x', 'm', 'val'

• 'M_yxmsz:','modeltype', 'model', 'y', 'x', 'm', 's', 'z', 'val'

wStockhausen/rTCSAM2015 documentation built on May 3, 2019, 7:14 p.m.