pathwayAnalysis: Pathway analysis
In wenbostar/metaX: A flexible and comprehensive software for processing omics data.
View source: R/pathwayAnalysis.R
pathwayAnalysis R Documentation
Pathway analysis
Description
Pathway analysis
Usage
pathwayAnalysis(id, id.type = "hmdb", outfile)
Arguments
id
A vector of metabolite IDs
id.type
The type of metabolite ID type, default is hmdb.
outfile
The output file name
Value
A data.frame object
Author(s)
Bo Wen wenbostar@gmail.com
Examples
## Not run:
res <- pathwayAnalysis(id=c("HMDB00060","HMDB00056","HMDB00064"),
outfile="pathway.csv")
head(res)
## End(Not run)
wenbostar/metaX documentation built on July 4, 2023, 7:50 p.m.
R Package Documentation
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View source: R/pathwayAnalysis.R
| pathwayAnalysis | R Documentation |
Pathway analysis
Description
Pathway analysis
Usage
pathwayAnalysis(id, id.type = "hmdb", outfile)
Arguments
id |
A vector of metabolite IDs |
id.type |
The type of metabolite ID type, default is hmdb. |
outfile |
The output file name |
Value
A data.frame object
Author(s)
Bo Wen wenbostar@gmail.com
Examples
## Not run:
res <- pathwayAnalysis(id=c("HMDB00060","HMDB00056","HMDB00064"),
outfile="pathway.csv")
head(res)
## End(Not run)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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