plsDAPara-class: An S4 class to represent the parameters for PLS-DA analysis
In wenbostar/metaX: A flexible and comprehensive software for processing omics data.
plsDAPara-class R Documentation
An S4 class to represent the parameters for PLS-DA analysis
Description
An S4 class to represent the parameters for PLS-DA analysis
Arguments
para
A oplsDAPara object
value
New value
Value
A object of plsDAPara
Slots
scaleThe method used to scale the data,
see preProcess in metaX
centerA logical which indicates if the matrix should be mean
centred or not
tThe method used to transform the data,
see transformation in metaX
validationThe method for validation, default is "CV"
ncompThe number of components used for PLS-DA, default is 2
npermThe number of permutations, default is 200
kfoldThe number of folds for cross-validation, default is 7
doA logical which indicates whether to do the plsDA analysis,
default is TRUE
methodThe method used in PLS-DA. See plsr
in pls
cpuThe number of cpus used, default is all cpus.
Author(s)
Bo Wen wenbostar@gmail.com
wenbostar/metaX documentation built on July 4, 2023, 7:50 p.m.
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| plsDAPara-class | R Documentation |
An S4 class to represent the parameters for PLS-DA analysis
Description
An S4 class to represent the parameters for PLS-DA analysis
Arguments
para |
A oplsDAPara object |
value |
New value |
Value
A object of plsDAPara
Slots
scaleThe method used to scale the data, see
preProcessin metaXcenterA logical which indicates if the matrix should be mean centred or not
tThe method used to transform the data, see
transformationin metaXvalidationThe method for validation, default is "CV"
ncompThe number of components used for PLS-DA, default is 2
npermThe number of permutations, default is 200
kfoldThe number of folds for cross-validation, default is 7
doA logical which indicates whether to do the plsDA analysis, default is TRUE
methodThe method used in PLS-DA. See
plsrin plscpuThe number of cpus used, default is all cpus.
Author(s)
Bo Wen wenbostar@gmail.com
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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