get_exp_bulk: Aggregate into bulk expression profile
In whtns/numbat: Haplotype-Aware CNV Analysis from scRNA-Seq
get_exp_bulk R Documentation
Aggregate into bulk expression profile
Description
Aggregate into bulk expression profile
Usage
get_exp_bulk(count_mat, lambdas_ref, gtf, verbose = FALSE)
Arguments
count_mat
dgCMatrix Gene expression counts
lambdas_ref
matrix Reference expression profiles
gtf
dataframe Transcript gtf
Value
dataframe Pseudobulk gene expression profile
whtns/numbat documentation built on Nov. 8, 2022, 10:48 a.m.
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| get_exp_bulk | R Documentation |
Aggregate into bulk expression profile
Description
Aggregate into bulk expression profile
Usage
get_exp_bulk(count_mat, lambdas_ref, gtf, verbose = FALSE)
Arguments
count_mat |
dgCMatrix Gene expression counts |
lambdas_ref |
matrix Reference expression profiles |
gtf |
dataframe Transcript gtf |
Value
dataframe Pseudobulk gene expression profile
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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